BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012G01SP1|AL426408
(769 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig420 1514 0.0
>3x_Contig420
Length = 1461
Score = 1514 bits (761), Expect = 0.0
Identities = 765/769 (99%)
Strand = Plus / Minus
Query: 1 gagatcatcagttcgwctctggttggaagcatttttttggatcccttaaacaattaccct 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 gagatcatcagttcgactctggttggaagcatttttttggatcccttaaacaattaccct 753
Query: 61 agatgaaaatgtagcacaataattcccgacagtmaacatgacaattaaccattataaaga 120
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 752 agatgaaaatgtagcacaataattcccgacagtaaacatgacaattaaccattataaaga 693
Query: 121 taccttgaagtaaaatgtgaagaaattaaatgagtattataacgttatatatgtacatat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 taccttgaagtaaaatgtgaagaaattaaatgagtattataacgttatatatgtacatat 633
Query: 181 gtgaaagcccaacttatcagtataacataaatcgtttcgatatattttgtgacttgtctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 gtgaaagcccaacttatcagtataacataaatcgtttcgatatattttgtgacttgtctt 573
Query: 241 gtttatagtgttagacaattaactgatcctcagttgatagttttcattaggggtatcaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 gtttatagtgttagacaattaactgatcctcagttgatagttttcattaggggtatcaag 513
Query: 301 tatcagtagtgagtatggaacatggcttattgtgggccttagttgatgttttatatttgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 tatcagtagtgagtatggaacatggcttattgtgggccttagttgatgttttatatttgg 453
Query: 361 ratatttccttttggcgtttgttttgtttgacaacaacaaggggatgatattgggtatat 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 aatatttccttttggcgtttgttttgtttgacaacaacaaggggatgatattgggtatat 393
Query: 421 catgctattatcttagcgaaatgtgttaaaaagatgatgttatattgtatcaggrtcaat 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 392 catgctattatcttagcgaaatgtgttaaaaagatgatgttatattgtatcaggatcaat 333
Query: 481 ctcccctgagattttcgatgatcgaattgaattctgtatcctcatcatccagctcatctg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 ctcccctgagattttcgatgatcgaattgaattctgtatcctcatcatccagctcatctg 273
Query: 541 gattggcgattcttagcggtcgcctttgttgagttacatctggtaaagaaccattgctga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 gattggcgattcttagcggtcgcctttgttgagttacatctggtaaagaaccattgctga 213
Query: 601 atctaggatttcccattgtcggacgtacaggaggttgtgttaggtctggttgatccatag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 atctaggatttcccattgtcggacgtacaggaggttgtgttaggtctggttgatccatag 153
Query: 661 tttctccaaacggactaacgatttgcgaatcactgatttcgtttccattattatccaatc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 tttctccaaacggactaacgatttgcgaatcactgatttcgtttccattattatccaatc 93
Query: 721 ttttctccctattttgacttacaccagatctatcagaggatgatgatgc 769
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92 ttttctccctattttgacttacaccagatctatcagaggatgatgatgc 44
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6016
Number of Sequences: 1807
Number of extensions: 6016
Number of successful extensions: 37
Number of sequences better than 1.0e-20: 1
length of query: 769
length of database: 10,358,551
effective HSP length: 16
effective length of query: 753
effective length of database: 10,329,639
effective search space: 7778218167
effective search space used: 7778218167
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)